Ia3.1 (1) For 10 glycolytic reactions (1-10), refer to your textbook, answer the following questions in the form of A→B step xx.[1.2](a) Which require(s) an input of energy in the form of ATP? Guestsl.r|(b) Which involve(s) substrate level phosphorylation?(c) Which reduce(s) NAD*?(d) Which is/are irreversible under intracellular conditions?(e) Which is the committed step?(f) Which is/are redox reaction?toolucese & Phosphate

Glycolysis is a catabolic pathway that breaks down glucose into pyruvate molecules. This occurs in…

Answered: (1) For 10 glycolytic reactions (1-10),…

Biochemistry

9th Edition

ISBN:9781319114671

Author:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.

Publisher:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.

Chapter1: Biochemistry: An Evolving Science

Section: Chapter Questions

Problem 1P

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20) Determine the number of ATPS generated from complete oxidation of a) glyceraldehyde-3-phosphate (G3P) b) malate c) mead acid (20 carbons, AS8.11) Indicate where everything is coming from! Like I worked out in class. (Ex: x ATPS, y NADHS from glycolysis; etc.)
(b) number of moles of ATP produced under aerobic glycolysis whereby pyruvate enters the mitochondrion for oxidative decarboxylation to generate acetyl-CoA that enters the citric acid cycle. Write the reac- tions for each step using words. They need not be balanced with respect to charge, protons released or consumed, and stoichiometry. Consider 2.5 ATP/NADH oxidized and 1.5 ATP/FADH2 oxidized. Enzymes need not be named. Compare the number of moles of ATP that are produced under anaerobic glycolysis to the Of the reactions producing ATP in the mitochondrion listed in part (b) above, which are not (c) influenced by the proton gradient across the inner mitochondrial membrane?
A dialyzed pigeon liver extract will catalyze the conversion of acetyl-CoAto palmitate and CoASH if supplied with Mg2+, NADPH, ATP, HCO3-, andcitrate.(a) If H14CO3– is supplied, what compounds will become labeled (permanently or transiently) during the course of the reaction? In whatcompounds will 14C accumulate?(b) Explain the role of citrate in this reaction.
ATP synthase, hexokinase, and isocitrate dehydrogenase are important enzymes in aerobic respiration. Please provide a description for each enzyme containing the following information: (1) the metabolic stage in aerobic respiration they are involved in, (2) the enzyme class where they belong, and (3) the chemical eaction they catalyze.
O2 is a competitive inhibitor of the hydrogenase enzyme that catalyzes the conversion between protons & electrons and H2. The inhibition by O2 is irreversible, permanently destroying the enzymatic activity.(a) Describe the relevant reactions that take place when a hydrogenase catalyzes H2 production in the presence of O2.(b) Derive the rate equation for v as a function of [E], [H+] and [O2], assuming that the electron concentration/delivery is not rate-limiting.
Consider a yeast cell undergoing fermentation but with defective alcohol dehydrogenase (hint: In yeast, alcohol dehydrogenase is responsible for shuttling reducing equivalents of cytosolic NADH to the mitochondria.) (Assume that the deficiency is isolated and will not influence the function of other respiration components). In these cells/tissues, determine the following from the catabolism of the 2.5 moles of the disaccharide lactose (will be hydrolyzed first to yield glucose and galactose). Net ATP from glycolysis ATP from oxidative decarboxylation (if applicable) ATP formed from Krebs cycle (if applicable) Total net ATP
1. (a) The reaction catalyzed by citrate synthase is the first step of the TCA cycle. In glycolysis, two key reactions to produce ATP occur because an unfavorable reaction is coupled to another reaction that is thermodynamically favorable. The reaction catalyzed by citrate synthase is similarly coupled to an unfavorable reaction in the TCA cycle. Write the unfavorable TCA reaction using structural formulas and write the key step that drives the two coupled reactions forward. What is the overall AG" of the coupled reactions? (b). K(yM) 25.7 Inhibitor Bromoacetyl-CoA ATP NADH 6800 8300 The inhibitor constants for three inhibitors of por- cine citrate synthase are summarized in the table on the right. The compounds were all determined to bind in the ac- tive site as competitive inhibitors of acetyl-CoA. Because they bind as competitive inhibitors, all three inhibitors must exhibit structural similarity to some part of acetyl-CoA. Look up in the textbook the structural formulas for…
The following nutrient molecule is digested and transported to a cell where it undergoes further catabolism: но c-(CH;)14-CH3 di In the table below, list the important products of the complete B oxidation of this molecule. • In the first column of the table, write the chemical formula, name, or standard biochemical symbol for a product molecule. In the second column, write the total number of these molecules produced. • Only list the Important products, including (1) molecules with any of the carbon atoms that were in the original molecule, (2) energy storage molecules (like ATP), and (3) newly oxidized or reduced coenzymes. List each product molecule on a separate row. You can add more rows if you need them. • Be sure you write the number of product molecules formed by the complete B oxidation of the molecule above. • Do not include the products of any catabolic activity that happens before or after B oxidation, including any necessary activation. If the molecule contains small parts…
In Bacillus subtilis, threonine is metabolized by the following sequence of reactions: (a) oxidation; (b) decarboxylation;(c) transamination; and (d) oxidation to produce pyruvate. Outline this sequence of steps, show the structures of thesubstances, use abbreviations for the cofactors, and show any enzyme-bound coenzymes. What type of enzyme bound intermediate is likely for reaction (d)?
create a detailed flow chart or diagram that will illustrate all the important features of the glycolytic pathway. I want you to place in your flow chart or diagram the following important information like: 1. the reactants and products of each step, 2. enzymes involved in each step, 3. important by-products generated in some steps, 4. type of the reaction of each step, 5. and the outline of the two stages of the pathway. Also, discuss briefly (4 sentences) how Galactose and Fructose enter the glycolytic pathway.
(a) Consider the oxidation of malate to oxaloacetate by NAD*: malate + NAD+ → oxaloacetate + NADH + H+ In yeast mitochondria, where the pH = 8.1, this reaction is exergonic only at low oxaloacetate concentrations. Assuming a pH = 8.1, a temperature of 37 °C, and the steady-state concentrations given below, calculate the maximum concentration of oxaloacetate at which the reaction will still be exergonic. malate + NAD*→ oxaloacetate + NADH + H* lactate + NAD →→ pyruvate + NADH + H+ half reaction Pyruvate + 2H+ + 2e → lactate Pyruvate + CO₂ + H + 2e → malate Intracellular steady state concentrations: malate = 410 μM; NAD = 20.0 mM; pyruvate = 3.22 mM; NADH = 290 μM; AG=+29.7 kJ/mol AG¹ = +25.1 kJ/mol E° (V) - 0.190 - 0.330 lactate 1.1 mM CO₂ = 15.5 torr
7) The following questions apply to glycolysis (figure 3-41 on page 79 of the 12th edition), the Krebs cycle (figure 3-44 on page 82) and to oxidative phosphorylation (figure 3-45 on page 84). Calculate the total amount of ATP produced from one glucose molecule if: a. The oxidation of NADH + H* to NAD* + 2H* produced 4 ATP. b. The oxidation of FADH₂ to FAD + 2H* produced 1 ATP. c. Each step of the Krebs cycle that produces NADH+H* produced FADH2 instead. d. Each step of the Krebs cycle that produces FADH2 produced NADH + H+ instead. e. Sucrose is substituted for glucose.

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